STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ugpBSugar ABC transporter, periplasmic binding protein (y4oP); Similar to SP:P55601 PID:2182560 percent identity: 23.29; identified by sequence similarity; putative. (469 aa)    
Predicted Functional Partners:
ugpA
Sugar ABC transporter, permease protein (y4oQ); Similar to SP:P55602 PID:2182561 percent identity: 35.94; identified by sequence similarity; putative.
 
 0.999
TP_0076
Sugar ABC transporter, permease protein (y4oR); Similar to SP:P55603 PID:2182562 percent identity: 35.38; identified by sequence similarity; putative.
 
 0.998
TP_0804
Sugar ABC transporter, ATP-binding protein (ugpC); Similar to SP:P10907 GB:U00039 PID:43249 PID:912455 GB:U00096 percent identity: 47.77; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
  
 0.995
cheW1
Purine-binding chemotaxis protein (cheW-1); Similar to GP:1765974 percent identity: 99.78; identified by sequence similarity; putative.
     
  0.880
msmE
Sugar ABC transporter, periplasmic binding protein (msmE); Similar to GP:2293308 percent identity: 22.83; identified by sequence similarity; putative.
  
  
 0.795
coxM
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 26.50; identified by sequence similarity; putative.
 
     0.462
coxL
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 26.11; identified by sequence similarity; putative.
 
     0.448
TP_0518
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 32.48; identified by sequence similarity; putative.
     
  0.441
TP_0545
Methylgalactoside ABC transporter, periplasmic galactose-binding protein (mglB-1); Similar to SP:P23925 GB:X59389 PID:40473 percent identity: 37.27; identified by sequence similarity; putative.
 
  
 0.426
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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