STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coxSQuinoline 2-oxidoreductase; Similar to GP:1644310 percent identity: 30.34; identified by sequence similarity; putative. (155 aa)    
Predicted Functional Partners:
coxL
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 26.11; identified by sequence similarity; putative.
 
 0.999
coxM
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 26.50; identified by sequence similarity; putative.
 
 0.999
TP_0939
Pyruvate oxidoreductase; Similar to PID:1001780 SP:P52965 PID:1006618 percent identity: 58.44; identified by sequence similarity; putative.
    
 0.895
capD
Capsular polysaccharide biosynthesis protein (cap5D); Similar to GP:1773343 percent identity: 42.49; identified by sequence similarity; putative.
       0.836
TP_0078
Spore coat polysaccharide biosynthesis protein (spsC); Similar to GB:X73124 SP:P39623 PID:413989 GB:AL009126 percent identity: 40.58; identified by sequence similarity; putative; Belongs to the DegT/DnrJ/EryC1 family.
       0.836
pta
Phosphate acetyltransferase (pta); Similar to GB:L23147 SP:P38503 PID:349833 percent identity: 42.30; identified by sequence similarity; putative.
    
 0.694
gltD
Glutamate synthase (gltA); Similar to GP:2244618 percent identity: 48.79; identified by sequence similarity; putative.
    
  0.661
TP_0076
Sugar ABC transporter, permease protein (y4oR); Similar to SP:P55603 PID:2182562 percent identity: 35.38; identified by sequence similarity; putative.
       0.639
apt
Adenine phosphoribosyltransferase (apt); Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
    
  0.609
add
Adenosine deaminase, putative; Putative nucleoside deaminase. May catalyze the hydrolytic deamination of adenosine or some similar substrate and play a role in purine metabolism; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
    
  0.603
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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