| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| TP_0018 | dksA | TP_0018 | TP_0096 | Transcription elongation factor; Similar to GB:AE000783 percent identity: 33.20; identified by sequence similarity; putative. | dnaK suppressor, putative; Similar to GB:AE000783 percent identity: 39.52; identified by sequence similarity; putative. | 0.704 |
| TP_0018 | greA | TP_0018 | TP_0019 | Transcription elongation factor; Similar to GB:AE000783 percent identity: 33.20; identified by sequence similarity; putative. | Transcription elongation factor (greA); Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.969 |
| TP_0018 | rpmF | TP_0018 | TP_0807 | Transcription elongation factor; Similar to GB:AE000783 percent identity: 33.20; identified by sequence similarity; putative. | Ribosomal protein L32 (rpmF); Similar to GB:AE000783 percent identity: 49.12; identified by sequence similarity; putative; Belongs to the bacterial ribosomal protein bL32 family. | 0.497 |
| TP_0018 | rpoA | TP_0018 | TP_0212 | Transcription elongation factor; Similar to GB:AE000783 percent identity: 33.20; identified by sequence similarity; putative. | DNA-directed RNA polymerase, alpha subunit (rpoA); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.946 |
| TP_0018 | rpoB | TP_0018 | TP_0241 | Transcription elongation factor; Similar to GB:AE000783 percent identity: 33.20; identified by sequence similarity; putative. | DNA-directed RNA polymerase, beta subunit (rpoB); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.946 |
| TP_0018 | rpoC | TP_0018 | TP_0242 | Transcription elongation factor; Similar to GB:AE000783 percent identity: 33.20; identified by sequence similarity; putative. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.962 |
| TP_0018 | rpoZ | TP_0018 | TP_0701 | Transcription elongation factor; Similar to GB:AE000783 percent identity: 33.20; identified by sequence similarity; putative. | DNA-directed RNA polymerase, putative; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits (By similarity). | 0.949 |
| dksA | TP_0018 | TP_0096 | TP_0018 | dnaK suppressor, putative; Similar to GB:AE000783 percent identity: 39.52; identified by sequence similarity; putative. | Transcription elongation factor; Similar to GB:AE000783 percent identity: 33.20; identified by sequence similarity; putative. | 0.704 |
| dksA | greA | TP_0096 | TP_0019 | dnaK suppressor, putative; Similar to GB:AE000783 percent identity: 39.52; identified by sequence similarity; putative. | Transcription elongation factor (greA); Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.704 |
| dksA | infA | TP_0096 | TP_0097 | dnaK suppressor, putative; Similar to GB:AE000783 percent identity: 39.52; identified by sequence similarity; putative. | Translation initiation factor 1 (infA); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.717 |
| dksA | map | TP_0096 | TP_0842 | dnaK suppressor, putative; Similar to GB:AE000783 percent identity: 39.52; identified by sequence similarity; putative. | Methionine aminopeptidase (map); Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.663 |
| dksA | obg | TP_0096 | TP_0742 | dnaK suppressor, putative; Similar to GB:AE000783 percent identity: 39.52; identified by sequence similarity; putative. | GTP-binding protein (obg); An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.773 |
| dksA | rpmF | TP_0096 | TP_0807 | dnaK suppressor, putative; Similar to GB:AE000783 percent identity: 39.52; identified by sequence similarity; putative. | Ribosomal protein L32 (rpmF); Similar to GB:AE000783 percent identity: 49.12; identified by sequence similarity; putative; Belongs to the bacterial ribosomal protein bL32 family. | 0.662 |
| dksA | rpoA | TP_0096 | TP_0212 | dnaK suppressor, putative; Similar to GB:AE000783 percent identity: 39.52; identified by sequence similarity; putative. | DNA-directed RNA polymerase, alpha subunit (rpoA); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.902 |
| dksA | rpoB | TP_0096 | TP_0241 | dnaK suppressor, putative; Similar to GB:AE000783 percent identity: 39.52; identified by sequence similarity; putative. | DNA-directed RNA polymerase, beta subunit (rpoB); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.944 |
| dksA | rpoC | TP_0096 | TP_0242 | dnaK suppressor, putative; Similar to GB:AE000783 percent identity: 39.52; identified by sequence similarity; putative. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.962 |
| dksA | rpoZ | TP_0096 | TP_0701 | dnaK suppressor, putative; Similar to GB:AE000783 percent identity: 39.52; identified by sequence similarity; putative. | DNA-directed RNA polymerase, putative; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits (By similarity). | 0.925 |
| greA | TP_0018 | TP_0019 | TP_0018 | Transcription elongation factor (greA); Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | Transcription elongation factor; Similar to GB:AE000783 percent identity: 33.20; identified by sequence similarity; putative. | 0.969 |
| greA | dksA | TP_0019 | TP_0096 | Transcription elongation factor (greA); Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | dnaK suppressor, putative; Similar to GB:AE000783 percent identity: 39.52; identified by sequence similarity; putative. | 0.704 |
| greA | rpmF | TP_0019 | TP_0807 | Transcription elongation factor (greA); Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | Ribosomal protein L32 (rpmF); Similar to GB:AE000783 percent identity: 49.12; identified by sequence similarity; putative; Belongs to the bacterial ribosomal protein bL32 family. | 0.497 |