STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metIAmino acid ABC transporter, permease protein (yaeE); Similar to GP:2314762 percent identity: 44.55; identified by sequence similarity; putative. (219 aa)    
Predicted Functional Partners:
metN
Amino acid ABC transporter, ATP-binding protein (abc); Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
 0.999
tpn32
Lipoprotein (tpn32); Similar to GP:2108234 percent identity: 100.00; identified by sequence similarity; putative.
 0.999
TP_0121
Conserved hypothetical protein; Similar to GB:L42023 SP:P44641 PID:1003549 PID:1222253 PID:1204581 percent identity: 30.37; identified by sequence similarity; putative; Belongs to the radical SAM superfamily. KamA family.
       0.533
TP_0118
Predicted coding region TP0118; Hypothetical protein; identified by Glimmer; putative.
       0.531
lolD
ABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
    
  0.477
TP_0964
ABC transporter, ATP-binding protein; Similar to GB:AL009126 percent identity: 49.32; identified by sequence similarity; putative.
    
  0.477
flgG1
Flagellar basal-body rod protein (flgG-1); Similar to GB:AE000783 percent identity: 62.12; identified by sequence similarity; putative.
   
   0.473
flgG2
Flagellar basal-body rod protein (flgG-2); Similar to GB:AE000783 percent identity: 50.37; identified by sequence similarity; putative.
   
   0.473
mgtE
Mg2+ transport protein (mgtE); Acts as a magnesium transporter.
   
   0.416
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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