STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP_0143Thiamine ABC transporter, permease protein, putative; Similar to PID:1098688 percent identity: 26.02; identified by sequence similarity; putative. (593 aa)    
Predicted Functional Partners:
tbpA
Thiamine ABC transporter, thiamine-binding periplasmic protein, putative; Similar to GB:D10483 SP:P31550 GB:U09984 PID:216488 PID:497658 percent identity: 30.87; identified by sequence similarity; putative.
 
 
 0.998
TP_0142
Thiamine ABC transporter, ATP-binding protein, putative; Similar to GB:L42023 SP:P45171 PID:1007359 PID:1221479 PID:1205583 percent identity: 36.19; identified by sequence similarity; putative.
 
 
 0.994
potA
Spermidine/putrescine ABC transporter, ATP-binding protein (potA); Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 0.824
potC
Spermidine/putrescine ABC transporter, permease protein (potC); Similar to GB:L42023 SP:P45169 PID:1007355 PID:1221477 PID:1205581 percent identity: 40.16; identified by sequence similarity; putative.
 
  
  0.752
TP_0804
Sugar ABC transporter, ATP-binding protein (ugpC); Similar to SP:P10907 GB:U00039 PID:43249 PID:912455 GB:U00096 percent identity: 47.77; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
  
 0.718
lolD
ABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
  
 
  0.549
TP_0964
ABC transporter, ATP-binding protein; Similar to GB:AL009126 percent identity: 49.32; identified by sequence similarity; putative.
  
 
  0.549
fadD1
long-chain-fatty-acid--CoA ligase; Similar to GB:AE000783 percent identity: 39.55; identified by sequence similarity; putative.
       0.541
potD
Spermidine/putrescine ABC transporter, periplasmic binding protein (potD); Similar to GB:M64519 SP:P23861 PID:147329 GB:U00096 PID:1651550 percent identity: 31.38; identified by sequence similarity; putative.
  
  
  0.449
ftr1
Conserved hypothetical integral membrane protein; Similar to GB:X73124 SP:P39595 PID:413951 GB:AL009126 percent identity: 32.05; identified by sequence similarity; putative.
   
  
 0.449
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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