STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbpAThiamine ABC transporter, thiamine-binding periplasmic protein, putative; Similar to GB:D10483 SP:P31550 GB:U09984 PID:216488 PID:497658 percent identity: 30.87; identified by sequence similarity; putative. (335 aa)    
Predicted Functional Partners:
TP_0142
Thiamine ABC transporter, ATP-binding protein, putative; Similar to GB:L42023 SP:P45171 PID:1007359 PID:1221479 PID:1205583 percent identity: 36.19; identified by sequence similarity; putative.
    
 0.999
TP_0143
Thiamine ABC transporter, permease protein, putative; Similar to PID:1098688 percent identity: 26.02; identified by sequence similarity; putative.
 
 
 0.998
TP_0804
Sugar ABC transporter, ATP-binding protein (ugpC); Similar to SP:P10907 GB:U00039 PID:43249 PID:912455 GB:U00096 percent identity: 47.77; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
    
  0.633
fadD1
long-chain-fatty-acid--CoA ligase; Similar to GB:AE000783 percent identity: 39.55; identified by sequence similarity; putative.
       0.541
TP_0518
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 32.48; identified by sequence similarity; putative.
 
     0.539
potA
Spermidine/putrescine ABC transporter, ATP-binding protein (potA); Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
    
  0.530
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.