STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP_0147Alpha-amylase 1, putative; Similar to SP:P09961 PID:2689 percent identity: 27.92; identified by sequence similarity; putative. (619 aa)    
Predicted Functional Partners:
TP_0358
Conserved hypothetical protein; Similar to PID:1653832 percent identity: 27.06; identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 57 family.
 
  
  0.948
TP_0413
Phosphoglucomutase; Similar to GB:AE000783 percent identity: 35.60; identified by sequence similarity; putative.
 
  
  0.939
TP_0642
Phosphomannomutase (manB); Similar to GB:M34393 SP:P18159 PID:142994 PID:2226139 GB:AL009126 percent identity: 41.55; identified by sequence similarity; putative.
    
  0.930
rnfC
Nitrogen fixation protein (rnfC); Similar to GB:X72888 GB:X79064 PID:435525 PID:483572 PID:1905810 percent identity: 27.00; identified by sequence similarity; putative.
     
 0.924
TP_0149
Predicted coding region TP0149; Hypothetical protein; identified by Glimmer; putative.
     
 0.908
rnfD
Conserved hypothetical integral membrane protein; Similar to GP:1787917 percent identity: 29.71; identified by sequence similarity; putative.
     
 0.892
TP_0990
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 23.34; identified by sequence similarity; putative.
  
  
  0.883
TP_0153
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 37.67; identified by sequence similarity; putative.
     
 0.859
TP_0148
Predicted coding region TP0148; Hypothetical protein; identified by Glimmer; putative.
     
 0.851
TP_0150
Predicted coding region TP0150; Hypothetical protein; identified by Glimmer; putative.
     
 0.850
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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