STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TP_0172Predicted coding region TP0172; Hypothetical protein; identified by Glimmer; putative. (175 aa)    
Predicted Functional Partners:
cheW1
Purine-binding chemotaxis protein (cheW-1); Similar to GP:1765974 percent identity: 99.78; identified by sequence similarity; putative.
  
 
 0.901
TP_0173
Predicted coding region TP0173; Hypothetical protein; identified by Glimmer; putative.
      0.848
TP_0177
Predicted coding region TP0177; Hypothetical protein; identified by Glimmer; putative.
       0.721
TP_0174
Predicted coding region TP0174; Hypothetical protein; identified by Glimmer; putative.
       0.706
TP_0175
Predicted coding region TP0175; Hypothetical protein; identified by Glimmer; putative.
       0.706
TP_0176
Predicted coding region TP0176; Hypothetical protein; identified by Glimmer; putative.
       0.585
TP_0179
Predicted coding region TP0179; Hypothetical protein; identified by Glimmer; putative.
       0.570
TP_0485
Adenylate cyclase; Similar to GP:1754638 percent identity: 40.99; identified by sequence similarity; putative.
  
 
 0.564
fliI
Flagellum-specific ATP synthase (fliI); Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum.
  
    0.538
fliP
Flagellar biosynthetic protein (fliP); Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
   
    0.514
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.