STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tprGTpr protein G (tprG); Similar to GP:2196926 percent identity: 85.22; identified by sequence similarity; putative. (756 aa)    
Predicted Functional Partners:
TP_0318
Predicted coding region TP0318; Hypothetical protein; identified by Glimmer; putative.
       0.773
TP_0548
Predicted coding region TP0548; Hypothetical protein; identified by Glimmer; putative; Belongs to the UPF0164 family.
      
 0.580
tmpC
Membrane lipoprotein (tmpC); Binds purine nucleosides and may play a role in purine nucleoside uptake. May be part of an ABC-type nucleoside uptake system. Has highest affinity for guanosine, followed by inosine and adenosine. Has very low affinity for cytidine and does not bind thymidine. Belongs to the BMP lipoprotein family.
       0.566
TP_0320
Predicted coding region TP0320; Hypothetical protein; identified by Glimmer; putative.
       0.558
tp92
Outer membrane protein; Might be part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane; Belongs to the BamA family.
     
 0.557
TP_0136
Predicted coding region TP0136; Hypothetical protein; identified by Glimmer; putative.
      
 0.449
TP_0321
Ribose/galactose ABC transporter, ATP-binding protein (rbsA-2); Similar to GB:AE000783 percent identity: 39.48; identified by sequence similarity; putative.
       0.417
TP_0322
Ribose/galactose ABC transporter, permease protein (rbsC-1); Similar to GB:AE000783 percent identity: 29.58; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
       0.417
TP_0323
Ribose/galactose ABC transporter, permease protein (rbsC-2); Similar to GB:AE000783 percent identity: 32.47; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
       0.417
TP_0433
Predicted coding region TP0433; Hypothetical protein; identified by Glimmer; putative.
      
 0.412
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.