STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP_0325Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 26.72; identified by sequence similarity; putative. (988 aa)    
Predicted Functional Partners:
TP_0324
Predicted coding region TP0324; Hypothetical protein; identified by Glimmer; putative.
      0.916
tp92
Outer membrane protein; Might be part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane; Belongs to the BamA family.
     
 0.898
ompH
Cationic outer membrane protein (ompH); Similar to GB:M34854 SP:P31519 PID:155479 percent identity: 22.44; identified by sequence similarity; putative.
     
 0.669
mutS
DNA mismatch repair protein (mutS); This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (By similarity).
       0.529
TP_0321
Ribose/galactose ABC transporter, ATP-binding protein (rbsA-2); Similar to GB:AE000783 percent identity: 39.48; identified by sequence similarity; putative.
       0.520
TP_0322
Ribose/galactose ABC transporter, permease protein (rbsC-1); Similar to GB:AE000783 percent identity: 29.58; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
       0.520
TP_0323
Ribose/galactose ABC transporter, permease protein (rbsC-2); Similar to GB:AE000783 percent identity: 32.47; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
       0.520
tmpC
Membrane lipoprotein (tmpC); Binds purine nucleosides and may play a role in purine nucleoside uptake. May be part of an ABC-type nucleoside uptake system. Has highest affinity for guanosine, followed by inosine and adenosine. Has very low affinity for cytidine and does not bind thymidine. Belongs to the BMP lipoprotein family.
     
 0.441
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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