STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpB1V-type ATPase, subunit B (atpB-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit (By similarity). (430 aa)    
Predicted Functional Partners:
atpE
V-type ATPase, subunit E, putative; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpA1
V-type ATPase, subunit A (atpA-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit (By similarity); Belongs to the ATPase alpha/beta chains family.
 
0.999
atpD1
V-type ATPase, subunit D (atpD-1); Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpI1
V-type ATPase, subunit I (atpI-1); Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
ntpK
V-type ATPase, subunit K (atpK-1); Similar to GB:AE000783 percent identity: 53.96; identified by sequence similarity; putative.
 
 0.999
TP_0531
V-type ATPase, subunit F, putative; Similar to PID:1199637 SP:Q60185 percent identity: 31.63; identified by sequence similarity; putative.
  
 0.999
TP_0534
Predicted coding region TP0534; Hypothetical protein; identified by Glimmer; putative.
  
 0.999
atpD2
V-type ATPase, subunit D (atpD-2); Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.998
atpA2
V-type ATPase, subunit A (atpA-2); Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit (By similarity); Belongs to the ATPase alpha/beta chains family.
 
0.998
atpI2
V-type ATPase, subunit I (atpI-2); Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the V-ATPase 116 kDa subunit family.
  
 0.993
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.