Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| TP_0432 | atpA1 | TP_0432 | TP_0426 | Predicted coding region TP0432; Hypothetical protein; identified by Glimmer; putative. | V-type ATPase, subunit A (atpA-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit (By similarity); Belongs to the ATPase alpha/beta chains family. | 0.456 |
| TP_0432 | atpD1 | TP_0432 | TP_0428 | Predicted coding region TP0432; Hypothetical protein; identified by Glimmer; putative. | V-type ATPase, subunit D (atpD-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.467 |
| TP_0432 | atpI1 | TP_0432 | TP_0429 | Predicted coding region TP0432; Hypothetical protein; identified by Glimmer; putative. | V-type ATPase, subunit I (atpI-1); Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the V-ATPase 116 kDa subunit family. | 0.467 |
| TP_0432 | coaX | TP_0432 | TP_0431 | Predicted coding region TP0432; Hypothetical protein; identified by Glimmer; putative. | Conserved hypothetical protein; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family. | 0.634 |
| TP_0432 | ntpK | TP_0432 | TP_0430 | Predicted coding region TP0432; Hypothetical protein; identified by Glimmer; putative. | V-type ATPase, subunit K (atpK-1); Similar to GB:AE000783 percent identity: 53.96; identified by sequence similarity; putative. | 0.546 |
| atpA1 | TP_0432 | TP_0426 | TP_0432 | V-type ATPase, subunit A (atpA-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit (By similarity); Belongs to the ATPase alpha/beta chains family. | Predicted coding region TP0432; Hypothetical protein; identified by Glimmer; putative. | 0.456 |
| atpA1 | atpD1 | TP_0426 | TP_0428 | V-type ATPase, subunit A (atpA-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit (By similarity); Belongs to the ATPase alpha/beta chains family. | V-type ATPase, subunit D (atpD-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
| atpA1 | atpI1 | TP_0426 | TP_0429 | V-type ATPase, subunit A (atpA-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit (By similarity); Belongs to the ATPase alpha/beta chains family. | V-type ATPase, subunit I (atpI-1); Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the V-ATPase 116 kDa subunit family. | 0.999 |
| atpA1 | coaX | TP_0426 | TP_0431 | V-type ATPase, subunit A (atpA-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit (By similarity); Belongs to the ATPase alpha/beta chains family. | Conserved hypothetical protein; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family. | 0.546 |
| atpA1 | ntpK | TP_0426 | TP_0430 | V-type ATPase, subunit A (atpA-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit (By similarity); Belongs to the ATPase alpha/beta chains family. | V-type ATPase, subunit K (atpK-1); Similar to GB:AE000783 percent identity: 53.96; identified by sequence similarity; putative. | 0.999 |
| atpD1 | TP_0432 | TP_0428 | TP_0432 | V-type ATPase, subunit D (atpD-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. | Predicted coding region TP0432; Hypothetical protein; identified by Glimmer; putative. | 0.467 |
| atpD1 | atpA1 | TP_0428 | TP_0426 | V-type ATPase, subunit D (atpD-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. | V-type ATPase, subunit A (atpA-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit (By similarity); Belongs to the ATPase alpha/beta chains family. | 0.999 |
| atpD1 | atpI1 | TP_0428 | TP_0429 | V-type ATPase, subunit D (atpD-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. | V-type ATPase, subunit I (atpI-1); Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the V-ATPase 116 kDa subunit family. | 0.999 |
| atpD1 | coaX | TP_0428 | TP_0431 | V-type ATPase, subunit D (atpD-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. | Conserved hypothetical protein; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family. | 0.560 |
| atpD1 | ntpK | TP_0428 | TP_0430 | V-type ATPase, subunit D (atpD-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. | V-type ATPase, subunit K (atpK-1); Similar to GB:AE000783 percent identity: 53.96; identified by sequence similarity; putative. | 0.999 |
| atpI1 | TP_0432 | TP_0429 | TP_0432 | V-type ATPase, subunit I (atpI-1); Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the V-ATPase 116 kDa subunit family. | Predicted coding region TP0432; Hypothetical protein; identified by Glimmer; putative. | 0.467 |
| atpI1 | atpA1 | TP_0429 | TP_0426 | V-type ATPase, subunit I (atpI-1); Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the V-ATPase 116 kDa subunit family. | V-type ATPase, subunit A (atpA-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit (By similarity); Belongs to the ATPase alpha/beta chains family. | 0.999 |
| atpI1 | atpD1 | TP_0429 | TP_0428 | V-type ATPase, subunit I (atpI-1); Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the V-ATPase 116 kDa subunit family. | V-type ATPase, subunit D (atpD-1); Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
| atpI1 | coaX | TP_0429 | TP_0431 | V-type ATPase, subunit I (atpI-1); Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the V-ATPase 116 kDa subunit family. | Conserved hypothetical protein; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family. | 0.560 |
| atpI1 | ntpK | TP_0429 | TP_0430 | V-type ATPase, subunit I (atpI-1); Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the V-ATPase 116 kDa subunit family. | V-type ATPase, subunit K (atpK-1); Similar to GB:AE000783 percent identity: 53.96; identified by sequence similarity; putative. | 0.999 |
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