STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP_0434Predicted coding region TP0434; Hypothetical protein; identified by Glimmer; putative. (227 aa)    
Predicted Functional Partners:
TP_0433
Predicted coding region TP0433; Hypothetical protein; identified by Glimmer; putative.
     
0.804
TP_0711
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 27.11; identified by sequence similarity; putative.
  
 0.793
TP_0484
Predicted coding region TP0484; Hypothetical protein; identified by Glimmer; putative.
  
 0.671
TP_0593
Predicted coding region TP0593; Hypothetical protein; identified by Glimmer; putative.
  
 0.671
nadD
Conserved hypothetical protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
   
  0.645
TP_0445
4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme (thiJ); Similar to GB:AE000783 percent identity: 31.82; identified by sequence similarity; putative.
    
  0.636
TP_0432
Predicted coding region TP0432; Hypothetical protein; identified by Glimmer; putative.
       0.603
TP_0597
Predicted coding region TP0597; Hypothetical protein; identified by Glimmer; putative.
     
 0.546
TP_0598
Predicted coding region TP0598; Hypothetical protein; identified by Glimmer; putative.
     
 0.546
TP_0136
Predicted coding region TP0136; Hypothetical protein; identified by Glimmer; putative.
     
 0.525
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.