STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP_0454Predicted coding region TP0454; Hypothetical protein; identified by Glimmer; putative. (229 aa)    
Predicted Functional Partners:
TP_0485
Adenylate cyclase; Similar to GP:1754638 percent identity: 40.99; identified by sequence similarity; putative.
  
 
 0.870
TP_0455
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 28.00; identified by sequence similarity; putative.
       0.837
cheW1
Purine-binding chemotaxis protein (cheW-1); Similar to GP:1765974 percent identity: 99.78; identified by sequence similarity; putative.
  
 
  0.789
TP_0261
Catabolite gene activator, putative; Similar to PID:1653345 percent identity: 30.99; identified by sequence similarity; putative.
     
 0.607
TP_0456
Predicted coding region TP0456; Hypothetical protein; identified by Glimmer; putative.
       0.603
TP_0468
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 28.43; identified by sequence similarity; putative.
    
 0.571
TP_0220
Anti-sigma F factor antagonist (spoIIAA-1); Similar to GB:M25260 SP:P26777 PID:304171 percent identity: 29.35; identified by sequence similarity; putative; Belongs to the anti-sigma-factor antagonist family.
  
 
  0.552
TP_0233
Anti-sigma F factor antagonist, putative; Similar to GB:M25260 SP:P26777 PID:304171 percent identity: 25.26; identified by sequence similarity; putative; Belongs to the anti-sigma-factor antagonist family.
  
 
  0.552
TP_0540
Anti-sigma F factor antagonist (spoIIAA-2); Similar to GB:M17643 SP:P10727 PID:143613 PID:1303998 GB:AL009126 percent identity: 23.23; identified by sequence similarity; putative; Belongs to the anti-sigma-factor antagonist family.
  
 
  0.552
fliP
Flagellar biosynthetic protein (fliP); Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
   
    0.499
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.