STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TP_0706Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 36.30; identified by sequence similarity; putative. (308 aa)    
Predicted Functional Partners:
mrcA
Penicillin-binding protein (pbp-2); Similar to GB:AE000783 percent identity: 40.76; identified by sequence similarity; putative.
 
   
 0.798
TP_0806
femA protein, putative; Similar to GB:AE000783 percent identity: 32.57; identified by sequence similarity; putative.
      
 0.671
TP_0707
Predicted coding region TP0707; Hypothetical protein; identified by Glimmer; putative.
       0.592
TP_0702
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 31.72; identified by sequence similarity; putative.
 
    
0.436
TP_0708
Predicted coding region TP0708; Hypothetical protein; identified by Glimmer; putative.
       0.436
TP_0623
Membrane-bound lytic murein transglycosylase D (dniR); Similar to SP:P23931 GB:X60739 PID:1208972 PID:581068 GB:U00096 percent identity: 32.28; identified by sequence similarity; putative.
    
 0.403
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.