STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP_0708Predicted coding region TP0708; Hypothetical protein; identified by Glimmer; putative. (171 aa)    
Predicted Functional Partners:
TP_0567
Conserved hypothetical protein; Similar to PID:1165270 PID:1196323 GB:AE000783 percent identity: 30.48; identified by sequence similarity; putative.
    
 
 0.906
fliF
Flagellar basal-body M ring protein (fliF); The M ring may be actively involved in energy transduction.
    
   0.769
flhA
Flagellar biosynthesis protein (flhA); Involved in the export of flagellum proteins; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
    
   0.769
TP_0675
Predicted coding region TP0675; Hypothetical protein; identified by Glimmer; putative.
      
 0.613
TP_0709
RNA polymerase sigma-28 factor; Similar to GB:J03169 SP:P17211 PID:153486 PID:153487 percent identity: 47.79; identified by sequence similarity; putative; Belongs to the sigma-70 factor family.
       0.601
TP_0710
Conserved hypothetical protein; Similar to PID:1165252 GB:AE000783 percent identity: 32.48; identified by sequence similarity; putative.
       0.596
TP_0707
Predicted coding region TP0707; Hypothetical protein; identified by Glimmer; putative.
       0.556
TP_0421
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 27.26; identified by sequence similarity; putative.
      
 0.509
TP_0711
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 27.11; identified by sequence similarity; putative.
       0.508
TP_0706
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 36.30; identified by sequence similarity; putative.
       0.436
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.