STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP_0747Predicted coding region TP0747; Hypothetical protein; identified by Glimmer; putative. (344 aa)    
Predicted Functional Partners:
ppdK
Pyruvate, phosphate dikinase; Catalyzes the reversible phosphorylation of pyruvate and phosphate; Belongs to the PEP-utilizing enzyme family.
       0.831
cfpA
Cytoplasmic filament protein A (cfpA); Component of the cytoplasmic filaments that run the length of the organism just underneath the cytoplasmic membrane.
       0.670
TP_0749
Predicted coding region TP0749; Hypothetical protein; identified by Glimmer; putative.
       0.543
rplU
Ribosomal protein L21 (rplU); This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.519
TP_0744
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 35.24; identified by sequence similarity; putative.
       0.509
rpmA
Ribosomal protein L27 (rpl27); Similar to PID:1653447 percent identity: 62.96; identified by sequence similarity; putative; Belongs to the bacterial ribosomal protein bL27 family.
       0.453
TP_0750
Hypothetical protein; Similar to PID:1098674 PID:1098673 percent identity: 81.25; identified by sequence similarity; putative.
       0.427
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.