STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP_0750Hypothetical protein; Similar to PID:1098674 PID:1098673 percent identity: 81.25; identified by sequence similarity; putative. (223 aa)    
Predicted Functional Partners:
TP_0751
Predicted coding region TP0751; Hypothetical protein; identified by Glimmer; putative.
     
 0.921
TP_0289
Predicted coding region TP0289; Hypothetical protein; identified by Glimmer; putative.
   
 0.750
TP_0749
Predicted coding region TP0749; Hypothetical protein; identified by Glimmer; putative.
     
 0.747
cfpA
Cytoplasmic filament protein A (cfpA); Component of the cytoplasmic filaments that run the length of the organism just underneath the cytoplasmic membrane.
     
 0.650
TP_0245
Predicted coding region TP0245; Hypothetical protein; identified by Glimmer; putative.
  
 
 0.608
dnaK
Heat shock protein 70 (dnaK); Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
  0.493
TP_0421
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 27.26; identified by sequence similarity; putative.
    
  0.477
TP_0223
Aspartate aminotransferase (tpaaT); Similar to GP:2104501 percent identity: 99.77; identified by sequence similarity; putative.
   
 
  0.455
TP_0752
Predicted coding region TP0752; Hypothetical protein; identified by Glimmer; putative.
      
 0.433
TP_0747
Predicted coding region TP0747; Hypothetical protein; identified by Glimmer; putative.
       0.427
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.