STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP_0785Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 27.37; identified by sequence similarity; putative. (228 aa)    
Predicted Functional Partners:
TP_0786
ABC transporter, ATP-binding protein, putative; Similar to GB:D12938 SP:P31220 PID:285780 PID:551337 PID:606140 percent identity: 52.52; identified by sequence similarity; putative.
  
  
 0.981
TP_0515
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 24.85; identified by sequence similarity; putative.
  
 
 0.977
TP_0784
Predicted coding region TP0784; Hypothetical protein; identified by Glimmer; putative.
     
 0.920
flgC
Flagellar basal-body rod protein (flgC); Similar to GP:2105146 percent identity: 67.11; identified by sequence similarity; putative.
    
   0.722
TP_0883
Conserved hypothetical integral membrane protein; Similar to GB:AE000783 percent identity: 19.26; identified by sequence similarity; putative.
     
 0.652
TP_0884
Conserved hypothetical integral membrane protein; Similar to GB:AE000783 percent identity: 30.66; identified by sequence similarity; putative.
     
 0.652
fliM
Flagellar motor switch protein (fliM); FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity).
    
   0.557
tp92
Outer membrane protein; Might be part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane; Belongs to the BamA family.
  
  
 0.541
TP_0783
Predicted coding region TP0783; Hypothetical protein; identified by Glimmer; putative.
       0.515
flaB3
Flagellar filament 31 kDa core protein (flaB3); Component of the core of the flagella.
    
   0.472
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.