STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP_0790Antibiotic transport protein, putative; Similar to GB:U00010 PID:466786 percent identity: 24.60; identified by sequence similarity; putative. (888 aa)    
Predicted Functional Partners:
TP_0789
Predicted coding region TP0789; Hypothetical protein; identified by Glimmer; putative.
 
   
 0.958
TP_0969
Predicted coding region TP0969; Hypothetical protein; identified by Glimmer; putative; Belongs to the TP096X family.
      
 0.606
ispDF
Conserved hypothetical protein; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF); In the N-terminal section; belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
     
 0.527
TP_0312
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 28.69; identified by sequence similarity; putative.
  
     0.483
TP_0791
Predicted coding region TP0791; Hypothetical protein; identified by Glimmer; putative.
       0.483
TP_0989
P26; Similar to GB:AE000783 percent identity: 31.90; identified by sequence similarity; putative.
 
 
   0.481
TP_0095
Predicted coding region TP0095; Hypothetical protein; identified by Glimmer; putative.
  
     0.465
TP_0920
Predicted coding region TP0920; Hypothetical protein; identified by Glimmer; putative.
 
     0.431
TP_0966
Predicted coding region TP0966; Hypothetical protein; identified by Glimmer; putative; Belongs to the TP096X family.
      
 0.412
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.