STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP_0791Predicted coding region TP0791; Hypothetical protein; identified by Glimmer; putative. (81 aa)    
Predicted Functional Partners:
flaB2
Flagellar filament 33 kDa core protein (flaB2); Component of the core of the flagella.
       0.572
TP_0790
Antibiotic transport protein, putative; Similar to GB:U00010 PID:466786 percent identity: 24.60; identified by sequence similarity; putative.
       0.483
TP_0789
Predicted coding region TP0789; Hypothetical protein; identified by Glimmer; putative.
       0.458
TP_0793
Predicted coding region TP0793; Hypothetical protein; identified by Glimmer; putative.
       0.423
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.