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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP_0815Predicted coding region TP0815; Hypothetical protein; identified by Glimmer; putative. (327 aa)    
Predicted Functional Partners:
trxB
Thioredoxin reductase (trxB); Similar to GB:AL009126 percent identity: 46.10; identified by sequence similarity; putative.
       0.571
TP_0934
Glutamate transporter, putative; Similar to GB:AE000783 percent identity: 19.74; identified by sequence similarity; putative; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
     0.534
TP_0990
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 23.34; identified by sequence similarity; putative.
  
     0.501
TP_0592
Predicted coding region TP0592; Hypothetical protein; identified by Glimmer; putative.
  
     0.499
TP_0522
Predicted coding region TP0522; Hypothetical protein; identified by Glimmer; putative.
  
     0.470
hflK
Lambda CII stability-governing protein (hflK); HflC and HflK could encode or regulate a protease.
  
    0.459
hflC
Lambda CII stability-governing protein (hflC); HflC and HflK could regulate a protease.
  
    0.459
TP_0369
Predicted coding region TP0369; Hypothetical protein; identified by Glimmer; putative.
  
     0.413
TP_1029
Predicted coding region TP1029; Hypothetical protein; identified by Glimmer; putative.
  
    0.412
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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