STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP_0936Hemolysin, putative; Similar to PID:1653594 percent identity: 27.83; identified by sequence similarity; putative. (357 aa)    
Predicted Functional Partners:
TP_0027
Hemolysin, putative; Similar to GB:AE000783 percent identity: 25.71; identified by sequence similarity; putative.
  
     0.773
TP_0028
Hemolysin, putative; Similar to PID:1653594 percent identity: 26.34; identified by sequence similarity; putative.
  
     0.772
TP_0939
Pyruvate oxidoreductase; Similar to PID:1001780 SP:P52965 PID:1006618 percent identity: 58.44; identified by sequence similarity; putative.
       0.601
TP_0937
Conserved hypothetical protein; Similar to SP:P94559 PID:1770061 GB:AL009126 percent identity: 27.63; identified by sequence similarity; putative.
       0.461
TP_0938
Predicted coding region TP0938; Hypothetical protein; identified by Glimmer; putative.
       0.461
TP_0935
Similar to GB:X65195 PID:295180 PID:48001 percent identity: 37.77; identified by sequence similarity; putative.
       0.448
ybeY
Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
    0.414
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.