STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP_0969Predicted coding region TP0969; Hypothetical protein; identified by Glimmer; putative; Belongs to the TP096X family. (539 aa)    
Predicted Functional Partners:
TP_0967
Predicted coding region TP0967; Hypothetical protein; identified by Glimmer; putative; Belongs to the TP096X family.
     
0.799
TP_0968
Predicted coding region TP0968; Hypothetical protein; identified by Glimmer; putative; Belongs to the TP096X family.
     
0.793
TP_0964
ABC transporter, ATP-binding protein; Similar to GB:AL009126 percent identity: 49.32; identified by sequence similarity; putative.
     
 0.676
TP_0966
Predicted coding region TP0966; Hypothetical protein; identified by Glimmer; putative; Belongs to the TP096X family.
     
0.676
TP_0963
Conserved hypothetical integral membrane protein; Similar to GB:AL009126 percent identity: 31.84; identified by sequence similarity; putative.
     
 0.674
TP_0790
Antibiotic transport protein, putative; Similar to GB:U00010 PID:466786 percent identity: 24.60; identified by sequence similarity; putative.
      
 0.606
macA
Membrane fusion protein, putative; Similar to GB:L42023 PID:1005989 PID:1220998 PID:1205141 SP:Q57500 percent identity: 25.88; identified by sequence similarity; putative.
       0.575
tpd
Membrane antigen, pathogen-specific (tpd); This antigen is a pathogen-specific membrane immunogen; Belongs to the UPF0423 family.
     
 0.558
TP_0962
Conserved hypothetical integral membrane protein; Similar to GB:AL009126 percent identity: 28.89; identified by sequence similarity; putative.
     
 0.542
TP_0959
Predicted coding region TP0959; Hypothetical protein; identified by Glimmer; putative.
     
 0.417
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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