STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP_1034Conserved hypothetical integral membrane protein; Similar to SP:P45394 PID:606134 GB:U00096 PID:1789587 percent identity: 33.02; identified by sequence similarity; putative. (341 aa)    
Predicted Functional Partners:
TP_1033
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 30.74; identified by sequence similarity; putative.
 
     0.649
TP_1032
Predicted coding region TP1032; Hypothetical protein; identified by Glimmer; putative.
       0.546
mgtE
Mg2+ transport protein (mgtE); Acts as a magnesium transporter.
   
   0.498
rsmA
Dimethyladenosine transferase (ksgA); Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
   0.478
TP_0561
Conserved hypothetical protein; Similar to PID:882672 SP:P55140 GB:U00096 PID:1789140 percent identity: 36.96; identified by sequence similarity; putative.
   
   0.441
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.