| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| VC_0008 | VC_0009 | VC_0008 | VC_0009 | Amino acid ABC transporter, ATP-binding protein; Similar to SP:P54954 PID:1408500 GB:AL009126; identified by sequence similarity; putative. | Amino acid ABC transproter, permease protein; Similar to PID:1006570 SP:P52625 PID:1006567; identified by sequence similarity; putative. | 0.997 |
| VC_0008 | VC_0010 | VC_0008 | VC_0010 | Amino acid ABC transporter, ATP-binding protein; Similar to SP:P54954 PID:1408500 GB:AL009126; identified by sequence similarity; putative. | Amino acid ABC transporter, periplasmic amino acid-binding portion; Similar to PID:1006570 SP:P52626 PID:1006568; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 3 family. | 0.975 |
| VC_0008 | VC_0011 | VC_0008 | VC_0011 | Amino acid ABC transporter, ATP-binding protein; Similar to SP:P54954 PID:1408500 GB:AL009126; identified by sequence similarity; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.402 |
| VC_0008 | dnaA | VC_0008 | VC_0012 | Amino acid ABC transporter, ATP-binding protein; Similar to SP:P54954 PID:1408500 GB:AL009126; identified by sequence similarity; putative. | Chromosomal DNA replication initiator DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids (By similarity). | 0.438 |
| VC_0009 | VC_0008 | VC_0009 | VC_0008 | Amino acid ABC transproter, permease protein; Similar to PID:1006570 SP:P52625 PID:1006567; identified by sequence similarity; putative. | Amino acid ABC transporter, ATP-binding protein; Similar to SP:P54954 PID:1408500 GB:AL009126; identified by sequence similarity; putative. | 0.997 |
| VC_0009 | VC_0010 | VC_0009 | VC_0010 | Amino acid ABC transproter, permease protein; Similar to PID:1006570 SP:P52625 PID:1006567; identified by sequence similarity; putative. | Amino acid ABC transporter, periplasmic amino acid-binding portion; Similar to PID:1006570 SP:P52626 PID:1006568; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 3 family. | 0.992 |
| VC_0009 | VC_0011 | VC_0009 | VC_0011 | Amino acid ABC transproter, permease protein; Similar to PID:1006570 SP:P52625 PID:1006567; identified by sequence similarity; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.402 |
| VC_0009 | dnaA | VC_0009 | VC_0012 | Amino acid ABC transproter, permease protein; Similar to PID:1006570 SP:P52625 PID:1006567; identified by sequence similarity; putative. | Chromosomal DNA replication initiator DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids (By similarity). | 0.428 |
| VC_0010 | VC_0008 | VC_0010 | VC_0008 | Amino acid ABC transporter, periplasmic amino acid-binding portion; Similar to PID:1006570 SP:P52626 PID:1006568; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 3 family. | Amino acid ABC transporter, ATP-binding protein; Similar to SP:P54954 PID:1408500 GB:AL009126; identified by sequence similarity; putative. | 0.975 |
| VC_0010 | VC_0009 | VC_0010 | VC_0009 | Amino acid ABC transporter, periplasmic amino acid-binding portion; Similar to PID:1006570 SP:P52626 PID:1006568; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 3 family. | Amino acid ABC transproter, permease protein; Similar to PID:1006570 SP:P52625 PID:1006567; identified by sequence similarity; putative. | 0.992 |
| VC_0010 | VC_0011 | VC_0010 | VC_0011 | Amino acid ABC transporter, periplasmic amino acid-binding portion; Similar to PID:1006570 SP:P52626 PID:1006568; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 3 family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.536 |
| VC_0010 | dnaA | VC_0010 | VC_0012 | Amino acid ABC transporter, periplasmic amino acid-binding portion; Similar to PID:1006570 SP:P52626 PID:1006568; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 3 family. | Chromosomal DNA replication initiator DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids (By similarity). | 0.524 |
| VC_0010 | dnaN | VC_0010 | VC_0013 | Amino acid ABC transporter, periplasmic amino acid-binding portion; Similar to PID:1006570 SP:P52626 PID:1006568; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 3 family. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.452 |
| VC_0010 | gyrB | VC_0010 | VC_0015 | Amino acid ABC transporter, periplasmic amino acid-binding portion; Similar to PID:1006570 SP:P52626 PID:1006568; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 3 family. | DNA gyrase, subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.406 |
| VC_0010 | recF | VC_0010 | VC_0014 | Amino acid ABC transporter, periplasmic amino acid-binding portion; Similar to PID:1006570 SP:P52626 PID:1006568; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 3 family. | recF protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (By similarity). | 0.419 |
| VC_0011 | VC_0008 | VC_0011 | VC_0008 | Hypothetical protein; Identified by Glimmer2; putative. | Amino acid ABC transporter, ATP-binding protein; Similar to SP:P54954 PID:1408500 GB:AL009126; identified by sequence similarity; putative. | 0.402 |
| VC_0011 | VC_0009 | VC_0011 | VC_0009 | Hypothetical protein; Identified by Glimmer2; putative. | Amino acid ABC transproter, permease protein; Similar to PID:1006570 SP:P52625 PID:1006567; identified by sequence similarity; putative. | 0.402 |
| VC_0011 | VC_0010 | VC_0011 | VC_0010 | Hypothetical protein; Identified by Glimmer2; putative. | Amino acid ABC transporter, periplasmic amino acid-binding portion; Similar to PID:1006570 SP:P52626 PID:1006568; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 3 family. | 0.536 |
| VC_0011 | dnaA | VC_0011 | VC_0012 | Hypothetical protein; Identified by Glimmer2; putative. | Chromosomal DNA replication initiator DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids (By similarity). | 0.628 |
| VC_0011 | dnaN | VC_0011 | VC_0013 | Hypothetical protein; Identified by Glimmer2; putative. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.491 |