Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VC_0058Carbonic anhydrase, family 3; Similar to GB:AE000657; identified by sequence similarity; putative. (184 aa)    
Predicted Functional Partners:
VC_0586
Carbonic anhydrase, putative; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 
 
 0.941
VC_A0890
Glyoxylase I family protein; Similar to GB:U00096 PID:1552764 PID:1786385 PID:971393; identified by sequence similarity; putative.
 
    0.686
VC_A0274
Carbonic anhydrase; Similar to GP:2773324; identified by sequence similarity; putative.
      
 0.681
VC_A0527
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.559
VC_0795
Citrate/sodium symporter; Similar to GB:M83146 SP:P31602 GB:X12599 GB:Y00525 PID:149181; identified by sequence similarity; putative.
      
 0.530
VC_0059
Hypothetical protein; Identified by Glimmer2; putative.
       0.503
VC_A0752
Thioredoxin 2; Similar to SP:P33636 GB:U00096 PID:1788936 PID:1799987; identified by sequence similarity; putative.
   
 
 0.495
VC_0306
Thioredoxin; Similar to SP:P00274 GB:M87049 GB:K02845 GB:M10424 GB:M12779; identified by sequence similarity; putative; Belongs to the thioredoxin family.
    
 
 0.492
VC_0977
Conserved hypothetical protein; Identified by Glimmer2; putative.
    
 
 0.492
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
  
  
 0.464
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.