Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC_0263Galactosyl-transferase, putative; Similar to PID:1929427; identified by sequence similarity; putative. (184 aa)    
Predicted Functional Partners:
VC_0262
UDP-glucose 4-epimerase; Similar to PID:1929426; identified by sequence similarity; putative.
  
 0.989
VC_0260
Mannosyl-transferase; Similar to PID:1929425; identified by sequence similarity; putative.
 
  
 0.943
VC_0937
Exopolysaccharide biosynthesis protein, putative; Similar to GP:3493609; identified by sequence similarity; putative.
 
  
 0.912
rfbA
Mannose-1-phosphate guanylyltransferase; Similar to GB:X59554 SP:Q07024 PID:48383; identified by sequence similarity; putative.
  
  
 0.854
VC_0244
Perosamine synthase; Similar to GB:X59554 PID:48386; identified by sequence similarity; putative; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.842
VC_0936
Polysaccharide export-related protein; Similar to GB:L05588 SP:Q02728 PID:152191; identified by sequence similarity; putative.
 
  
 0.801
VC_0259
Lipopolysaccharide biosynthesis protein RfbV; Similar to GB:X59554 PID:48400 PID:1929424; identified by sequence similarity; putative.
 
  
 0.775
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.747
VC_0927
UDP-N-acetyl-D-mannosamine transferase; Similar to GB:U09239 PID:485280; identified by sequence similarity; putative; Belongs to the glycosyltransferase 26 family.
    
 0.704
VC_0921
Polysaccharide export protein, putative; Similar to PID:747670 SP:Q48457; identified by sequence similarity; putative.
 
  
 0.679
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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