Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VC_0429Conserved hypothetical protein; Identified by Glimmer2; putative. (854 aa)    
Predicted Functional Partners:
VC_0430
Immunogenic protein; Similar to SP:P12920 PID:144105; identified by sequence similarity; putative.
 
  
 0.937
VC_A0144
Immunogenic protein; Similar to SP:P12920 PID:144105; identified by sequence similarity; putative.
 
  
 0.875
VC_0428
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    0.773
VC_0629
Multidrug resistance protein, putative; Similar to GB:U00096 PID:1736781 PID:1736784 PID:1788390 GB:U00096; identified by sequence similarity; putative; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
     0.474
VC_1744
Conserved hypothetical protein; Identified by Glimmer2; putative.
      
 0.425
VC_A0789
Conserved hypothetical protein; Identified by Glimmer2; putative.
      
 0.425
VC_A0845
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.425
VC_A0996
ABC transporter, ATP-binding protein; Similar to GB:L42023 PID:1006302 PID:1221167 PID:1205301 SP:Q57180; identified by sequence similarity; putative.
      
 0.425
VC_1485
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.406
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.