Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VC_0600Hypothetical protein; Identified by Glimmer2; putative. (450 aa)    
Predicted Functional Partners:
VC_1791
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.734
VC_0239
Conserved hypothetical protein; Identified by Glimmer2; putative.
   
 
 0.652
VC_0245
rfbG protein; Similar to GB:X59554 PID:48387; identified by sequence similarity; putative.
   
 
 0.644
VC_0259
Lipopolysaccharide biosynthesis protein RfbV; Similar to GB:X59554 PID:48400 PID:1929424; identified by sequence similarity; putative.
   
 
 0.644
VC_0920
Exopolysaccharide biosynthesis protein EpsF, putative; Similar to GP:1276879; identified by sequence similarity; putative.
   
 
 0.644
VC_0925
Polysaccharide biosynthesis protein, putative; Similar to GB:AE000666; identified by sequence similarity; putative.
   
 
 0.644
VC_A0958
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.643
VC_A0550
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.598
VC_0414
Hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.596
VC_A0517
1-phosphofructokinase; Similar to SP:P23539 GB:X53948 PID:405894 PID:41487 GB:U00096; identified by sequence similarity; putative; Belongs to the carbohydrate kinase PfkB family.
   
    0.594
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.