STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspKConserved hypothetical protein; ATP-dependent kinase, which is specific for glucosamine. Does not show kinase activity with any other sugar. Belongs to the eukaryotic-type N-acetylglucosamine kinase family. (325 aa)    
Predicted Functional Partners:
VC_0613
beta-N-acetylhexosaminidase; Similar to PID:1698442; identified by sequence similarity; putative.
 
  
 0.957
VC_0615
Endoglucanase-related protein; Similar to PID:1663519; identified by sequence similarity; putative.
 
     0.894
VC_1783
N-acetylglucosamine-6-phosphate deacetylase; Similar to SP:O32445; identified by sequence similarity; putative.
 
  
 0.849
nagA
N-acetylglucosamine-6-phosphate deacetylase; Involved in the first committed step in the biosynthesis of amino-sugar-nucleotides. Catalyzes the hydrolysis of the N-acetyl group of N-acetylglucosamine-6-phosphate (GlcNAc-6-P) to yield glucosamine 6- phosphate and acetate.
 
  
 0.830
VC_2217
beta-N-acetylhexosaminidase; Similar to PID:1698442; identified by sequence similarity; putative.
 
  
  0.802
VC_A0700
Chitodextrinase; Similar to GP:3928775; identified by sequence similarity; putative.
  
  
  0.792
VC_1073
Chitinase, putative; Similar to PID:1698444; identified by sequence similarity; putative.
  
  
  0.782
VC_0616
Peptide ABC transporter, ATP-binding protein; Similar to GB:Pyro_h; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
     
 0.777
glmS
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.755
VC_A0027
Chitinase; Similar to SP:P32823 PID:216207; identified by sequence similarity; putative.
  
  
  0.753
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.