Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VC_0132 | VC_0425 | VC_0132 | VC_0425 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.761 |
VC_0132 | VC_0901 | VC_0132 | VC_0901 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.768 |
VC_0132 | VC_1157 | VC_0132 | VC_1157 | Hypothetical protein; Identified by Glimmer2; putative. | Response regulator; Similar to PID:643672; identified by sequence similarity; putative. | 0.770 |
VC_0132 | VC_2276 | VC_0132 | VC_2276 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0255 family. | 0.561 |
VC_0132 | VC_2346 | VC_0132 | VC_2346 | Hypothetical protein; Identified by Glimmer2; putative. | Smp protein, putative; Similar to SP:P18838 GB:M30784 GB:X03046 PID:432633 PID:436177; identified by sequence similarity; putative. | 0.741 |
VC_0132 | ompU | VC_0132 | VC_0633 | Hypothetical protein; Identified by Glimmer2; putative. | Outer membrane protein OmpU; Forms pores that allow passive diffusion of small molecules across the outer membrane. | 0.772 |
VC_0425 | VC_0132 | VC_0425 | VC_0132 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.761 |
VC_0425 | VC_0901 | VC_0425 | VC_0901 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.772 |
VC_0425 | VC_1157 | VC_0425 | VC_1157 | Hypothetical protein; Identified by Glimmer2; putative. | Response regulator; Similar to PID:643672; identified by sequence similarity; putative. | 0.773 |
VC_0425 | VC_2346 | VC_0425 | VC_2346 | Hypothetical protein; Identified by Glimmer2; putative. | Smp protein, putative; Similar to SP:P18838 GB:M30784 GB:X03046 PID:432633 PID:436177; identified by sequence similarity; putative. | 0.766 |
VC_0425 | ompU | VC_0425 | VC_0633 | Hypothetical protein; Identified by Glimmer2; putative. | Outer membrane protein OmpU; Forms pores that allow passive diffusion of small molecules across the outer membrane. | 0.765 |
VC_0901 | VC_0132 | VC_0901 | VC_0132 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.768 |
VC_0901 | VC_0425 | VC_0901 | VC_0425 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.772 |
VC_0901 | VC_1157 | VC_0901 | VC_1157 | Hypothetical protein; Identified by Glimmer2; putative. | Response regulator; Similar to PID:643672; identified by sequence similarity; putative. | 0.863 |
VC_0901 | VC_2276 | VC_0901 | VC_2276 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0255 family. | 0.520 |
VC_0901 | VC_2346 | VC_0901 | VC_2346 | Hypothetical protein; Identified by Glimmer2; putative. | Smp protein, putative; Similar to SP:P18838 GB:M30784 GB:X03046 PID:432633 PID:436177; identified by sequence similarity; putative. | 0.758 |
VC_0901 | ompU | VC_0901 | VC_0633 | Hypothetical protein; Identified by Glimmer2; putative. | Outer membrane protein OmpU; Forms pores that allow passive diffusion of small molecules across the outer membrane. | 0.786 |
VC_1157 | VC_0132 | VC_1157 | VC_0132 | Response regulator; Similar to PID:643672; identified by sequence similarity; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.770 |
VC_1157 | VC_0425 | VC_1157 | VC_0425 | Response regulator; Similar to PID:643672; identified by sequence similarity; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.773 |
VC_1157 | VC_0901 | VC_1157 | VC_0901 | Response regulator; Similar to PID:643672; identified by sequence similarity; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.863 |
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