Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC_0657Ribosomal-protein-alanine acetyltransferase; Similar to GB:L42023 SP:P44305 PID:1004120 PID:1221913 PID:1204268; identified by sequence similarity; putative. (161 aa)    
Predicted Functional Partners:
VC_0656
DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.
  
    0.872
VC_0655
Acetyltransferase, putative; Similar to SP:P45473 PID:606096 GB:U00096 PID:1789546; identified by sequence similarity; putative.
  
  
 0.759
VC_0654
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.733
VC_A0319
Conserved hypothetical protein; Identified by Glimmer2; putative.
   
   0.622
VC_A0482
Conserved hypothetical protein; Identified by Glimmer2; putative.
   
   0.622
VC_A0486
Hypothetical protein; Identified by Glimmer2; putative.
   
   0.622
VC_1989
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
 
 0.619
VC_0651
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.600
VC_0652
Protease, putative; Similar to SP:P45527 PID:606098 GB:U00096 PID:1789548; identified by sequence similarity; putative.
       0.600
VC_A0189
Response regulator; Similar to PID:1736859 PID:1736868; identified by sequence similarity; putative.
    
   0.515
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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