STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_0814Transcriptional regulator, putative; Similar to GB:X76192 SP:P43640 PID:431929; identified by sequence similarity; putative. (159 aa)    
Predicted Functional Partners:
VC_0815
Hypothetical protein; Identified by Glimmer2; putative.
 
 
 
 0.993
mobA
Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
    
  0.614
VC_0816
Hypothetical protein; Identified by Glimmer2; putative.
       0.515
VC_1518
Hypothetical protein; Identified by Glimmer2; putative.
    
  0.514
VC_2032
Hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.512
VC_1246
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.492
VC_1224
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.470
VC_A0958
Hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.407
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.