Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| VC_1059 | VC_1060 | VC_1059 | VC_1060 | Oxidoreductase, short-chain dehydrogenase/reductase family; Similar to SP:P31808 GB:U17433 PID:603171 GB:U00096 PID:1742066; identified by sequence similarity; putative. | sohB protein, peptidase U7 family; Similar to GB:M73320 SP:P24213 PID:290470 GB:U00096 PID:1742067; identified by sequence similarity; putative. | 0.580 |
| VC_1059 | topA | VC_1059 | VC_1730 | Oxidoreductase, short-chain dehydrogenase/reductase family; Similar to SP:P31808 GB:U17433 PID:603171 GB:U00096 PID:1742066; identified by sequence similarity; putative. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.527 |
| VC_1060 | VC_1059 | VC_1060 | VC_1059 | sohB protein, peptidase U7 family; Similar to GB:M73320 SP:P24213 PID:290470 GB:U00096 PID:1742067; identified by sequence similarity; putative. | Oxidoreductase, short-chain dehydrogenase/reductase family; Similar to SP:P31808 GB:U17433 PID:603171 GB:U00096 PID:1742066; identified by sequence similarity; putative. | 0.580 |
| VC_1060 | topA | VC_1060 | VC_1730 | sohB protein, peptidase U7 family; Similar to GB:M73320 SP:P24213 PID:290470 GB:U00096 PID:1742067; identified by sequence similarity; putative. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.574 |
| VC_1060 | trpCF | VC_1060 | VC_1171 | sohB protein, peptidase U7 family; Similar to GB:M73320 SP:P24213 PID:290470 GB:U00096 PID:1742067; identified by sequence similarity; putative. | Indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; Bifunctional enzyme that catalyzes two sequential steps of tryptophan biosynthetic pathway. The first reaction is catalyzed by the isomerase, coded by the TrpF domain; the second reaction is catalyzed by the synthase, coded by the TrpC domain (By similarity). | 0.463 |
| topA | VC_1059 | VC_1730 | VC_1059 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Oxidoreductase, short-chain dehydrogenase/reductase family; Similar to SP:P31808 GB:U17433 PID:603171 GB:U00096 PID:1742066; identified by sequence similarity; putative. | 0.527 |
| topA | VC_1060 | VC_1730 | VC_1060 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | sohB protein, peptidase U7 family; Similar to GB:M73320 SP:P24213 PID:290470 GB:U00096 PID:1742067; identified by sequence similarity; putative. | 0.574 |
| topA | trpCF | VC_1730 | VC_1171 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; Bifunctional enzyme that catalyzes two sequential steps of tryptophan biosynthetic pathway. The first reaction is catalyzed by the isomerase, coded by the TrpF domain; the second reaction is catalyzed by the synthase, coded by the TrpC domain (By similarity). | 0.507 |
| trpCF | VC_1060 | VC_1171 | VC_1060 | Indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; Bifunctional enzyme that catalyzes two sequential steps of tryptophan biosynthetic pathway. The first reaction is catalyzed by the isomerase, coded by the TrpF domain; the second reaction is catalyzed by the synthase, coded by the TrpC domain (By similarity). | sohB protein, peptidase U7 family; Similar to GB:M73320 SP:P24213 PID:290470 GB:U00096 PID:1742067; identified by sequence similarity; putative. | 0.463 |
| trpCF | topA | VC_1171 | VC_1730 | Indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; Bifunctional enzyme that catalyzes two sequential steps of tryptophan biosynthetic pathway. The first reaction is catalyzed by the isomerase, coded by the TrpF domain; the second reaction is catalyzed by the synthase, coded by the TrpC domain (By similarity). | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.507 |