STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_1084Sensory box sensor histidine kinase; Similar to PID:1773367; identified by sequence similarity; putative. (439 aa)    
Predicted Functional Partners:
VC_1087
Response regulator; Similar to GB:M63670 SP:P26408 GB:X61007 PID:151907 PID:46054; identified by sequence similarity; putative.
 
 
 
 0.961
VC_1081
Response regulator; Similar to GP:551953; identified by sequence similarity; putative.
 
   0.930
VC_1083
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.864
VC_1085
Sensor histidine kinase; Similar to PID:643672; identified by sequence similarity; putative.
 
   
0.848
VC_1082
Response regulator; Similar to PID:940149 GB:AE000512; identified by sequence similarity; putative.
 
   
 0.811
VC_1086
Response regulator; Similar to PID:1651932; identified by sequence similarity; putative.
   
 
 0.809
VC_1155
Response regulator; Similar to GP:551953; identified by sequence similarity; putative.
 
   
 0.710
VC_1349
Sensory box sensor histidine kinase/response regulator; Similar to PID:1653075; identified by sequence similarity; putative.
 
 
0.701
VC_1316
Chemotaxis protein CheY, putative; Similar to GB:X61231 PID:45323 SP:Q51455; identified by sequence similarity; putative.
 
 
   0.700
VC_A1096
Chemotaxis protein CheY; Similar to GB:U13166 PID:534836; identified by sequence similarity; putative.
  
   0.687
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.