Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC_1088Sensor histidine kinase; Similar to GB:L13078 SP:Q06067 PID:290419 GB:U00096 PID:1736874; identified by sequence similarity; putative. (534 aa)    
Predicted Functional Partners:
VC_1089
Periplasmic binding protein-related protein; Similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949; identified by sequence similarity; putative.
 
     0.897
VC_1087
Response regulator; Similar to GB:M63670 SP:P26408 GB:X61007 PID:151907 PID:46054; identified by sequence similarity; putative.
 
 
 
 0.774
VC_1349
Sensory box sensor histidine kinase/response regulator; Similar to PID:1653075; identified by sequence similarity; putative.
 
 
 0.755
VC_1090
Hypothetical protein; Identified by Glimmer2; putative.
       0.701
VC_2369
Sensor histidine kinase FexB; Similar to SP:P22763 GB:X53315 PID:40951 PID:606149 GB:U00096; identified by sequence similarity; putative.
 
 
 0.650
VC_A0182
Sigma-54 dependent transcriptional regulator; Similar to SP:P37013 GB:D28595 GB:U03846 PID:434587 PID:434588; identified by sequence similarity; putative.
 
 
 
 0.634
VC_0303
Sensor histidine kinase; Similar to GP:2808665; identified by sequence similarity; putative.
  
 
 0.603
VC_1653
Sensory box sensor histidine kinase/response regulator VieS; Similar to GP:3123890; identified by sequence similarity; putative.
 
 
 0.591
VC_A0704
Phosphoglycerate transport system transcriptional regulatory protein PgtA; Similar to GB:M13923 SP:P06184 PID:154255; identified by sequence similarity; putative.
 
 
 0.581
VC_1316
Chemotaxis protein CheY, putative; Similar to GB:X61231 PID:45323 SP:Q51455; identified by sequence similarity; putative.
 
 
   0.548
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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