STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_1122Cyclopropane-fatty-acyl-phospholipid synthase; Similar to GB:M98330 SP:P30010 PID:145514 GB:U00096 PID:1742735; identified by sequence similarity; putative. (432 aa)    
Predicted Functional Partners:
VC_1120
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 0.995
VC_1121
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 0.993
VC_1125
Hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.918
VC_1118
Transcriptional regulator, putative; Similar to PID:1653608; identified by sequence similarity; putative.
 
   
 0.917
VC_1119
Oxidoreductase, short-chain dehydrogenase/reductase family; Similar to SP:P25970; identified by sequence similarity; putative.
 
   
 0.878
VC_1124
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.839
flaG
Flagellin FlaG; Similar to PID:2271029; identified by sequence similarity; putative; To FlaG in other Vibrio species.
   
   0.801
VC_1123
Hypothetical protein; Identified by Glimmer2; putative.
       0.799
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
 
 0.751
kefB
Glutathione-regulated potassium-efflux system protein KefB; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.
   
 
 0.684
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.