Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC_1268Conserved hypothetical protein; Identified by Glimmer2; putative. (524 aa)    
Predicted Functional Partners:
VC_1269
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.959
VC_A0058
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.708
VC_1266
Hypothetical protein; Identified by Glimmer2; putative.
       0.691
VC_1267
Hypothetical protein; Identified by Glimmer2; putative.
       0.691
VC_1265
Hypothetical protein; Identified by Glimmer2; putative.
       0.688
VC_1270
Glyoxylase II family protein; Similar to GB:U00096 SP:P75849 PID:1787158; identified by sequence similarity; putative.
       0.666
VC_1537
Lipoprotein NlpC; Similar to GB:M14031 SP:P23898 PID:145446 GB:U00096 PID:1742788; identified by sequence similarity; putative.
  
   
 0.642
VC_1264
Iron-regulated protein A, putative; Similar to SP:P12608 PID:154525; identified by sequence similarity; putative.
       0.609
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.
       0.576
VC_0843
tagE protein; Similar to GB:U07173 PID:460955 PID:1100877; identified by sequence similarity; putative.
      
 0.559
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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