Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC_13444-hydroxyphenylpyruvate dioxygenase; Similar to PID:2108220; identified by sequence similarity; putative. (369 aa)    
Predicted Functional Partners:
VC_1345
Oxidoreductase, putative; Similar to SP:Q00667 PID:984327; identified by sequence similarity; putative.
 
 0.999
VC_1346
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.990
maiA
Glutathione S-transferase, putative; Similar to PID:2183249; identified by sequence similarity; putative; Belongs to the GST superfamily. Zeta family.
 
  
 0.974
phhA
Phenylalanine-4-hydroxylase; Similar to GB:M88627 SP:P43334 PID:476741; identified by sequence similarity; putative.
 
  
 0.960
VC_1293
Aspartate aminotransferase; Similar to SP:P00509 GB:X03629 GB:X05904 PID:41011 PID:41013; identified by sequence similarity; putative.
  
 
 0.955
VC_A0513
Amino acid biosynthesis aminotransferase; Similar to PID:1806263; identified by sequence similarity; putative.
  
 
 0.955
hisC
Histidinol-phosphate aminotransferase; Similar to SP:P06986 GB:U02071 GB:X03416 PID:41695 PID:41710; identified by sequence similarity; putative; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
 0.929
dadA
D-amino acid dehydrogenase, small subunit; Oxidative deamination of D-amino acids.
   
 
 0.914
VC_A0827
Pterin-4-alpha-carbinolamine dehydratase; Similar to GB:M88627 SP:P43335 PID:476742; identified by sequence similarity; putative.
  
  
 0.852
VC_A0496
Glutathione S-transferase, putative; Similar to SP:P28342 PID:167968 PID:18330; identified by sequence similarity; putative.
 
  
 0.830
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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