Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
VC_1345Oxidoreductase, putative; Similar to SP:Q00667 PID:984327; identified by sequence similarity; putative. (378 aa)    
Predicted Functional Partners:
VC_1344
4-hydroxyphenylpyruvate dioxygenase; Similar to PID:2108220; identified by sequence similarity; putative.
 
 0.999
maiA
Glutathione S-transferase, putative; Similar to PID:2183249; identified by sequence similarity; putative; Belongs to the GST superfamily. Zeta family.
 
 
 0.995
VC_1346
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.993
phhA
Phenylalanine-4-hydroxylase; Similar to GB:M88627 SP:P43334 PID:476741; identified by sequence similarity; putative.
 
  
 0.950
VC_A1004
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.727
VC_A0496
Glutathione S-transferase, putative; Similar to SP:P28342 PID:167968 PID:18330; identified by sequence similarity; putative.
 
  
 0.703
VC_A0827
Pterin-4-alpha-carbinolamine dehydratase; Similar to GB:M88627 SP:P43335 PID:476742; identified by sequence similarity; putative.
  
  
 0.632
VC_1293
Aspartate aminotransferase; Similar to SP:P00509 GB:X03629 GB:X05904 PID:41011 PID:41013; identified by sequence similarity; putative.
  
  
 0.507
VC_A0513
Amino acid biosynthesis aminotransferase; Similar to PID:1806263; identified by sequence similarity; putative.
  
  
 0.507
VC_A0605
Aminotransferase, class III; Similar to GB:Pyro_h; identified by sequence similarity; putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
  
 0.490
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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