Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VC_1360Amino acid ABC transporter, permease protein; Similar to SP:P45768 PID:606211 GB:U00096 PID:1789671; identified by sequence similarity; putative. (365 aa)    
Predicted Functional Partners:
VC_1359
Amino acid ABC transporter, ATP-binding protein; Similar to PID:1154897; identified by sequence similarity; putative.
 
 0.998
VC_1361
Amino acid ABC transporter, permease protein; Similar to PID:1154895; identified by sequence similarity; putative.
 
0.997
VC_1362
Amino acid ABC transporter, periplasmic amino acid-binding protein; Similar to PID:1154894; identified by sequence similarity; putative.
 
 0.990
VC_A1037
Amino acid ABC transporter, ATP-binding protein; Similar to PID:1051225 PID:1655715; identified by sequence similarity; putative.
 
 
 0.955
VC_0008
Amino acid ABC transporter, ATP-binding protein; Similar to SP:P54954 PID:1408500 GB:AL009126; identified by sequence similarity; putative.
 
 
 0.914
VC_A0759
Arginine ABC transporter, periplasmic arginine-binding protein; Similar to SP:P30859 GB:X67753 GB:X86160 PID:40931 PID:769791; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 3 family.
 
 0.778
VC_A1040
Amino acid ABC transporter, permease protein; Similar to GB:AE000782; identified by sequence similarity; putative.
 
 
0.710
VC_A1038
Amino acid ABC transporter, permease protein; Similar to GB:AE000782; identified by sequence similarity; putative.
 
 
0.693
VC_0009
Amino acid ABC transproter, permease protein; Similar to PID:1006570 SP:P52625 PID:1006567; identified by sequence similarity; putative.
 
 
0.680
VC_1358
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.676
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.