Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
VC_1495Hypothetical protein; Identified by Glimmer2; putative. (238 aa)    
Predicted Functional Partners:
VC_1496
Tail-specific protease; Similar to GP:216618; identified by sequence similarity; putative.
       0.735
proQ
Conserved hypothetical protein; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
       0.724
VC_1494
Aminopeptidase N; Similar to GB:M15273 SP:P04825 GB:M15676 GB:X04020 PID:147142; identified by sequence similarity; putative.
       0.703
VC_1493
Hypothetical protein; Identified by Glimmer2; putative.
       0.675
VC_1498
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.654
VC_1499
ABC transporter, ATP-binding protein; Similar to SP:P45861 PID:853754 GB:AL009126; identified by sequence similarity; putative.
       0.545
VC_1492
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.423
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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