Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
VC_1568ABC transporter, ATP-binding protein; Similar to GB:AL009126; identified by sequence similarity; putative. (233 aa)    
Predicted Functional Partners:
VC_1566
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
 0.998
VC_1567
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
 0.998
VC_1563
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.933
VC_1565
Outer membrane protein TolC, putative; Similar to SP:P02930 GB:X54049 PID:43101 PID:43107 PID:882565; identified by sequence similarity; putative.
   
 
 0.909
VC_2554
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
 
 0.814
VC_1629
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.793
VC_1882
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.793
VC_1884
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.793
VC_A0854
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.793
VC_1562
Beta-lactamase-related protein; Similar to GB:M19530 SP:P04190 SP:P14488 PID:143128; identified by sequence similarity; putative.
     
 0.712
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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