Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
VC_1597Multidrug transporter, putative; Similar to PID:1217600; identified by sequence similarity; putative. (477 aa)    
Predicted Functional Partners:
VC_1410
Multidrug resistance protein VceA; Similar to GP:3378278; identified by sequence similarity; putative.
 
 
 0.869
VC_0069
Multidrug resistance protein, putative; Similar to GB:L10328 SP:P31462 PID:290558 GB:U00096 PID:1790146; identified by sequence similarity; putative.
  
   
 0.629
VC_1565
Outer membrane protein TolC, putative; Similar to SP:P02930 GB:X54049 PID:43101 PID:43107 PID:882565; identified by sequence similarity; putative.
  
 
 0.554
tolC
Outer membrane protein TolC; Outer membrane channel, which is required for the function of several efflux systems (By similarity). Required to export RtxA cytotoxin; Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
  
 
 0.554
VC_1598
ABC transporter, periplasmic substrate-binding protein-related protein; Similar to GB:L42023 PID:1006358 PID:1221197 PID:1205330 SP:P45024; identified by sequence similarity; putative.
       0.524
VC_1409
Multidrug resistance protein, putative; Similar to GP:3378279; identified by sequence similarity; putative.
  
 
 0.486
VC_A0267
Multidrug resistance protein D; Similar to GB:X78969 PID:474915; identified by sequence similarity; putative.
  
   
 0.473
VC_1606
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.434
VC_A0347
Conserved hypothetical protein; Identified by Glimmer2; putative.
      
 0.425
VC_A0506
Conserved hypothetical protein; Identified by Glimmer2; putative.
      
 0.425
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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