Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC_1618Multidrug resistance protein, putative; Similar to SP:P43531 GB:U00096 PID:1742619 PID:1742630 PID:1787880; identified by sequence similarity; putative. (405 aa)    
Predicted Functional Partners:
VC_1617
Transcriptional regulator, LysR family; Similar to GB:X73124 SP:P39592 PID:413948 GB:AL009126; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
 
  
 0.790
VC_1619
Hypothetical protein; Identified by Glimmer2; putative.
       0.771
VC_1410
Multidrug resistance protein VceA; Similar to GP:3378278; identified by sequence similarity; putative.
 
 
 0.448
VC_1725
Beta-ketoadipate enol-lactone hydrolase, putative; Similar to GB:L05770 PID:141779; identified by sequence similarity; putative.
  
  
 0.428
leuC
3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
   
  
 0.412
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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