STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_1647Conserved hypothetical protein; Identified by Glimmer2; putative. (637 aa)    
Predicted Functional Partners:
VC_A0065
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.628
VC_A0568
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.590
VC_A0085
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.588
lifO
Lipase activator protein, putative; May be involved in the folding of the extracellular lipase during its passage through the periplasm; Belongs to the lipase chaperone family.
  
     0.583
VC_1646
Hypothetical protein; Identified by Glimmer2; putative.
       0.575
VC_1543
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.573
VC_0764
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.571
VC_0144
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.537
VC_A0762
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.525
VC_1317
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.488
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.