STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_1700Intracellular sepatation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. (181 aa)    
Predicted Functional Partners:
VC_1701
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.546
VC_1964
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.520
VC_1876
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0434 family.
  
     0.517
VC_1699
Hypothetical protein; Identified by Glimmer2; putative.
       0.498
VC_1702
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.445
VC_1703
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.445
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.