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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_1933Hypothetical protein; Identified by Glimmer2; putative. (156 aa)    
Predicted Functional Partners:
VC_1934
GGDEF family protein; Similar to GP:3341566; identified by sequence similarity; putative.
       0.786
VC_1935
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase-related protein; Similar to GB:U00096 PID:1787676; identified by sequence similarity; putative.
       0.556
VC_1936
Phosphatidate cytidylyltransferase, putative; Similar to GB:U00096 PID:1742297 PID:1742302 PID:1787677; identified by sequence similarity; putative; Belongs to the CDS family.
       0.556
VC_1937
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.556
VC_A0562
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.527
VC_1267
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.524
VC_1932
Hypothetical protein; Identified by Glimmer2; putative.
       0.517
VC_1266
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.500
VC_1665
ABC transporter, permease protein, putative; Similar to GB:U00096 PID:1742865 PID:1788052; identified by sequence similarity; putative.
  
     0.466
VC_1667
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.442
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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