Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC_1937Conserved hypothetical protein; Identified by Glimmer2; putative. (223 aa)    
Predicted Functional Partners:
VC_1936
Phosphatidate cytidylyltransferase, putative; Similar to GB:U00096 PID:1742297 PID:1742302 PID:1787677; identified by sequence similarity; putative; Belongs to the CDS family.
 
  
 0.991
VC_1935
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase-related protein; Similar to GB:U00096 PID:1787676; identified by sequence similarity; putative.
 
  
 0.968
VC_1934
GGDEF family protein; Similar to GP:3341566; identified by sequence similarity; putative.
       0.580
VC_2388
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.568
VC_1938
Conserved hypothetical protein; Identified by Glimmer2; putative.
     
 0.564
VC_1933
Hypothetical protein; Identified by Glimmer2; putative.
       0.556
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
  
 0.476
VC_1945
FAD monooxygenase, PheA/TfdB family; Similar to SP:P15245 PID:170525; identified by sequence similarity; putative.
  
   
 0.403
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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